Why you really do or don’t want me as a student…

Of the classes I took this last semester, there’s only one I haven’t blogged about at least once.

Masochist that I am, I went and took “Applied Calculus”, even though I’d gotten approval to count my previous semester of calculus (about 8 years ago) as fulfilling the mathematics requirement for graduation. The “applied” in the title of the class caught my eye, and after speaking to the instructor before the semester to find out what the class was like I decided that if there was time and money left I’d take the class. So I did.

Although I’d rank it as only the second most useful “Mathematics” course I’ve taken so far, Dr. Wolper was one of the best mathematics instructors I’ve had up to this point, so I’ve got no regrets for having spent the time and money to take it. I suspect I’ll remember a lot more of it than I did of the previous calculus class.

Anyway, getting to the point of this post:

There are times when I am unable to restrain myself and answer homework or exam questions in a terse, boring manner, regardless of the subject. If you’re an instructor and are wondering if you want me in your class, here is something to judge by.

Calculus (for those who don’t know) is more or less the math you use to deal with when, how, and how fast things change. In practical terms, when dealing with real-world applications this often means dealing with a graph of some data. A number of homework (and exam) problems this semester dealt with questions along the lines of “what would a graph of such-and-such a situation look like and how would you interpret it?”. Here’s one from early in the semester:

This was my answer:

You may judge for yourself whether this is a good answer or not…

I can has graduation?

The last undergraduate final is over.

Everything it taken care of save for one overdue library book, which I intend to take care of tomorrow.

All the other fees are paid. All the paperwork is done. I’m pretty sure I got well above the F– that was the minimum I needed on the Philosophy final to achieve the minimum passing grade. In fact, my only current stress about my grades is whether or not I managed to end out my last undergraduate semester with a 4.0 or not.

I FEEL BETTER THAN JAMES BROWN! WHEEEEEEEEEEEEEEEE!!!!!!!!!!!!!!!!!!!!!!!!!!

Let the wild, uncontrollable drunken orgiastic celebration begin!

After my nap

I’m having too much fun with this.

I finally managed to get Hugin to work, as you can see from the picture of the Dead Fish Museum above.

Okay, it’s the visitor’s center at the Fossil Butte National Monument, but it really is a museum of dead fish. And other fossils. If you click the image to get to the Panoramio page, you can even see where it is on the map: in fact if you zoom in, the building itself is visible in the aerial photo imagery.

Between digiKam’s ability to handle geocorrelation with tracks from my GPS, Panoramio’s support for geolocation and mapping (and connection to Google Earth…), playing with High Dynamic Range digital photography, and now panoramas, I’m beginning to develop an increased urge to travel around and take pictures again…

Nerd Photography in the Big Room

Readers may have noticed by now that I have a cheap but serviceable digital camera that I’ve been using to take pictures which occasionally show up here on the blog. (Hey, there’s another thing that the External Deliverer, in Its benevolence, might bring me: a nicer digital camera.)

I’ve been playing with geolocation for a while now. Just recently, I started also doing some crude playing with High Dynamic Range digital photography. It’s obviously going to take me some work to get it figured out and get better results, but what I’m getting so far doesn’t look too bad, at least in my own opinion. Kind of surreal, like Mars Rover pictures…

I’ve discovered that my Handy-Dandy Linux box has access to a couple of tools that make these easy.

I noticed a few days ago that digiKam is actually able to read .gpx format files downloaded from my GPS and then correlate the track from the GPS with the timestamps on the photos automatically, so in what little spare time I have I’ve been going back through my archives of GPS tracks and timestamped photos and trying to find as many to correlate as I can. I managed to get geolocation tagged into pictures from as long ago as three years or so. I also tagged this more recent one. I saw this place half a decade ago and had been wondering if it was still there. Last week we finally had a chance to visit and sure enough, it was there. If you were wondering where one could go to learn to do the Squirrel Dance, here it is.

Landscape and Sign:Don't Trespass on the 'I'

Today after classes I trudged up to the top of the hill at one corner of the campus with my trusty GPS in hand and took a few pictures, as you can tell. Since Google Earth seems to get most of it’s photos from Panoramio, I’ve started uploading them there. I may also get around to uploading them to flickr one of these days, too. I kind of need some pleasant distraction – I’m starting to hit the “Am I there yet???” phase of the semester. Just another week-and-a-half of classes, then finals, then I’m finally done. At least with the undergraduate stuff.

If you’re bored, there are a couple of additional pictures on the Panoramio site, here. You can also get the ICBM address there, and a .kml file for Google Earth so my pictures will pop up if you happen to run past an area where one of them is while you’re browsing the globe.

’tis the season to be greedy

Members of my immediate family start asking around this time of year about what kinds of things I’d like for Christmas presents this year.

This strikes me as a good way to break the week-long bout of blogstipation I’ve been having. Here, then, is what I want for Christmas, Xmas, Hannukah, Kwanzaa, Cephalopodmas, or whatever gift-giving winter holiday you prefer (each category is sorted roughly in order of desire at the moment):

Ridiculously Expensive Stuff

Which I only list on the off-chance that someone wins the lottery or happens to find an amazing bargain on “e-bay®” or something.

Relatively Expensive Books

Other kinda-expensive-but-maybe-you-can-find-it-at-reasonable-price stuff

Relatively Cheap Stuff (but still spiffy)

I know there was more, but my brain seems to have gone on break right now…

“Does beer and ice cream make gas?”

I get some odd Google searches hitting this site. Once in a while, however, I see one asking a question of vital importance and great usefulness to the general public. Today’s brief topic is this query: “Does beer and ice cream make gas?”.

I’m assuming the searcher did not mean gasoline. Biodiesel is all well and good, but who the heck would waste perfectly good beer and ice cream on such a thing? No, I assume the searcher wanted to know if eating these two fine foods together would expose one to the risk of increased flatulence.

Sad to say, the answer is most likely “yes”.

Flatulence gas (from humans, at least) is made up mostly of carbon dioxide and hydrogen gas[1], and for some people (but apparently not all!) methane. It’s worth noting that none of these components have any odor. All of the offensive smell comes from comparatively tiny amounts of sulfur-containing chemicals – most notably plain old Hydrogen Sulfide, and maybe a few molecules of indole-type compounds such as skatole which can make the origin of the stench obvious.

These main gases come from two sources – swallowed gases (air and carbonated beverages) and microbial fermentation. Obviously this is one place beer comes in – the carbonation adds to the amount of gas entering the digestive tract. Secondly, the beer probably contains some amount of remaining malt which some intestinal bacteria, like the yeast that made the beer in the first place, can break down and eat, possibly generating more carbon dioxide in the process. Beer also has small amounts of sulfur compounds in it which give it some of its flavors. It’s possible that some of this sulfur can end up as smelly by-products of microbial action as well.

I tend to assume that problems one might have with ice cream are mainly related to the lactose from the cream. Lactose is actually a combination of two kinds of “simple” sugar molecules linked together in pairs – glucose and galactose. Many unfortunate human beings are cursed with a lack of production of lactase, which is an enzyme that breaks lactose into its two simple sugars which can be easily absorbed and digested. Many bacteria which can live in the human intestine, on the other hand, make their own lactase. If the human eating the ice cream doesn’t make their own lactase so as to absorb and use up the simple sugars, it all gets down to the intestines where the intestinal bacteria can turn it into a major feast. Many bacteria generate a lot of carbon dioxide when eating these sugars, too, and this adds to the gases that build up in the intestine. This is similar to the issue with beans[2] and similarly ‘indigestible’ substances which can appear in food[3] – humans don’t use them up, so the bacteria get it all and make a huge amount of gas in the process of eating it.

Milk also has at least some sulfur in it[4], like just about any protein-containing food, but I’m not sure if it’s enough to add to the smell problem.

So, yes, beer and ice cream probably do make gas.

Incidentally, it seems as though methane production in humans only happens in some people. Methane is only produced by certain kinds of archaea, and not all humans have them growing in their intestines along with the regular bacteria. Don’t quote me on this, but I would tend to suspect that this would actually reduce the amount of gas that actually results in the end. Methanogens actually make the methane out of the other two major flatulence gases: carbon dioxide and hydrogen. I haven’t looked up the biochemistry, but I suspect the other byproduct is water. Since the pressure of a particular bubble of gas (and therefore its volume when your container is stretchable, like an intestine) is dependent on the number of actual molecules of any kind of gas in it, if you have methanogenic archaea in your intestines they should be taking a molecule of carbon dioxide plus more than one molecule of hydrogen gas, and producing just one molecule of methane out of it (plus some liquid water), so where you once had three or more molecules of gas you end up with just one. I’m sure somebody somewhere has done some kind of study on this, maybe I’ll go dig for it at some point. While I’m at it, perhaps I should look at patenting the use of archaeal “natural flora” as a probiotic?…

The picture at the head of this post, incidentally, came from this blog post of odd signs – apparently this one’s from an advertisement for some kind of backache treatment. Still, I couldn’t pass up putting it here…

[1] Furne JK, Levitt MD: “Factors influencing frequency of flatus emission by healthy subjects.” Digestive Diseases and Sciences, 1996; 41:8; pp 1631-1635
[2] Rockland LB, Gardiner BL, Pieczarka D: “Stimulation of Gas Production and Growth of Clostridium perfringens Type A (No. 3624) by Legumes.” Journal of Food Science; 1996; 34 (5); pp 411–414.
[3] Cummings JH, Macfarlane GT, Englyst HN: “Prebiotic digestion and fermentation” American Journal of Clinical Nutrition; 2001; 73(2); pp 415-420
[4] Ramsdell GA, Whittier GO: “Composition of Casein in Milk” Journal of Biological Chemistry; 1944; 154; pp 413-419

More Search Amusements. (p.s. I Ain’t Dead Yet.)

A bit longer of a delay between posts than I’d like, but here you go:

+ =?????

I am often amused (and regularly baffled) by the kinds of search queries that lead people to this blog.

I wrote a sloppy little script to parse the server’s access logs and figure out who’s searching for what, where. Since I added the ability to recognize Google Image Searches, it’s gotten even stranger.

I do get a lot of perfectly understandable hits – people looking for information about “heat-fixing slides”, expired jello, and looking for pictures of lactic-acid bacteria or whatnot. Some of them are pretty interesting questions…but first, some oddities.

At the top of my current wierd-o-meter: “carbonated leprechaun”…what??? What’s funnier is that this was a Google Image search – someone doesn’t just want information ABOUT carbonation of leprechauns, they want pictures. Now I can’t stop imagining a mash-up of “Darkman” and Leprechaun. Thanks a lot, whoever you are…”I needs me gold! ARGH! SUNLIGHT! [bubblebubblebubble…]”

Another recent one was just a search for the phrase “new england sucks”. As another Image search. Somebody not only doesn’t like New England, but they want pictures of “new england sucks”?…

Less risible but still kind of funny are searches influenced by unfamiliarity with the English language. I have no idea what the search for pictures related to “useful of DNA” was hoping to find. (Uses of DNA? How to “use” [work with] DNA? Diagrams of genetic processes?). I also see a number of searches just based on the name of the blog – people looking for information about furnishing “big rooms”. I have no idea what the search for “name of thing in room” was expected to turn up. This one’s another language issue, but even taking that into account I’m still baffled about this one. I wouldn’t expect google.de to return any useful information for “Sache im Zimmer” (the original search was actually from a Spanish-speaking area, but No Entiendo Espanol, so I’ll use a German analogy instead.)

Or from Sweden: “Aerobic Oxygen fraud”. Somebody’s figured out that we don’t actually need to breathe and that it’s all a ploy by the Oxygen Lobby to enslave us, I guess.

Maybe just because “chemicals” get mentioned here from time to time, I get the occasional hit from someone looking for illegal drug information (either technical or just news of drug busts or whatever). Note to “HILLBILLY METH” searcher: Hillbillies do moonshine. Meth comes from Rednecks. Jeez, doesn’t everyone have to do a semester of Rural Population Stereotype Taxonomy in college anymore?

There are some more relevant and interesting questions that show up here, too.

Oreo CookieI guess someone in southern California used an interesting analogy in their microbiology class, because I recently got a couple of searches from there looking for why the cell membrane is not like an Oreo® cookie. The answer: There’s no “creme” filling. No seriously – the membrane is two layers of the same kind of molecule stuck together. The phrase you’re looking for is “Phospholipid bilayer”. In a way, the molecules are a lot like detergents – they’ve got one end that “likes” water, and a long tail at the other end that doesn’t (much as oil doesn’t). Since the cell is surrounded by and full of water, you end up with one layer with all its hydrophilic ends touching the water outside the cell, and the other layer with its hydrophilic ends on the inside of the membrane touching the water inside the cell, and the hydrophobic ends of both layers all tangled up together in the middle – without anything between them. See? Not like an oreo cookie at all. Aside from this, cell membranes are also squishier and not chocolate flavored most of the time.

I’ll deal with “does beer and ice cream make gas” in another post later…

#1 on Google!

Over on scienceblogs.com’s The World’s Fair, the author has started an amusing meme.

It goes like this: the challenge is to find 5 sets of search terms for which your own blog or site is the #1 hit on a Google search. Note that it is acceptable to quote specific phrases but of course it’s more impressive if you don’t. Here are 8 that (as I type this) for which this blog is the #1 hit (links go to the blog address that is the hit):

There was at least one other which I’m having trouble remembering at the moment. Perhaps I’ll update later if I remember what it was.

Microbial Fuel Cell netcast…

It’s only my first attempt at anything like this, so constructive comments are welcome…

(Hopefully you can see the embedded audio player here…)For those of you just tuning in, this is a 90-second explanation of Why Microbial Fuel Cells work. A longer (though still simple) explanation can be found at a slightly older post here.[Update: this was featured in the November 6, 2007 broadcast! Hooray, I can now claim to be an international “radio personality”!]Presuming hosting this file doesn’t kill my bandwidth, I’ll leave it up here. BelowAbove, you should see an embedded flash player (assuming you have Macromedia® Flash® player installed) which you should be able to click on to start the audio. I’ll also place a direct download link below. It should be noted that like everything else on this blog (unless otherwise specified), this audio is also available under the Creative Commons non-commercial/attribution/share-alike license, so as long as you have no problem with the terms of that license you are welcome to copy, redistribute, put up on bittorrent, host a public performance, turn into an interpretative dance art project, or whatever else you might want to do with it so long as you give me credit for it, don’t use it for commercial purposes, and distribute any derivative works of it under the same terms.

You can download the audio directly from here – right-click on the link and select “save link as…”. Ogg Vorbis format available on request…

A short update…

I’ve got an Art History exam in the morning which has been consuming my time, but I wanted to get some kind of post up. Especially since it almost looks as though I just don’t post on Thursdays. I swear the recent several weeks of “no post on Thursday” is purely coincidental.

I’m still waiting to hear if This Week In Science got the audio file I sent them and whether or not they liked it. I did manage to find a legally-free embeddable flash-based audio player that I can use, so I’ll probably post it for listening to online or for downloading soon.

Meanwhile: One of my competitors in the College Blogging Scholarship 2007 competition had an interested post up the other day. Famous neuroscientist Shelley Batts of Retrospectacle posted about a bunch of computer people getting together to have a “hackfest”, where they all work on their projects and exchange ideas. She wonders if something similar might not be possible for scientists.

I have regularly found myself thinking about the possibility of a similar gathering for scientists. I wonder – would an international society of Peripatetic Scientists be feasible? What I envision would be a combination of “Science Cafe’” and “Semi-spontaneous field trip” (or even perhaps a “Flash Mob of Nerds”).

I picture groups of scientists, engineers, and other interested people converging on relatively short notice (say, no more than a week or so) to explore something together, whether it’s a section of a national park, or an observatory, or a grocery store, or even to just wander around in a public space discussing some topic. Rather than a carefully planned and organized event where people take turns “giving presentations”, I tend to suspect a more spontaneous exploration by a group of diverse people like this would result in much better horizontal meme transfer potential. It’s so much easier to participate and listen when one isn’t busy focusing on one’s own presentation material…

How many of you reading this might be interested in participating in this sort of thing?
(UPDATE: TO clarify, I mean how many of you, if you heard something like this was happening where you are, would be interested, not how many people are so incredibly impressed by me that they would travel across the world to be where I am…)